STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAMBasal cell adhesion molecule. (587 aa)    
Predicted Functional Partners:
PVRL2
Poliovirus receptor-related protein 2.
 
  
 0.734
LOC102738651
Afadin-like.
    
 0.635
LOC102742614
Peripheral plasma membrane protein CASK-like.
    
  0.579
LOC102730290
Macrophage scavenger receptor types I and II-like.
    
 0.526
SRCRB4D
Scavenger receptor cysteine-rich domain-containing group B protein.
    
 0.526
CUZD1
CUB and zona pellucida-like domain-containing protein 1.
    
 0.526
CD163
Scavenger receptor cysteine-rich type 1 protein M130 isoform X3.
    
 0.526
TJP1
Tight junction protein ZO-1 isoform X1; Belongs to the MAGUK family.
    
 0.509
LOC102748980
Tight junction protein ZO-3-like.
    
 0.509
ROBO4
Roundabout homolog 4.
   
 
 0.506
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.