STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARP2FERM, RhoGEF and pleckstrin domain-containing protein 2. (170 aa)    
Predicted Functional Partners:
LOC102727396
FERM, RhoGEF and pleckstrin domain-containing protein 2-like.
 
     0.920
LOC102736535
Protein 4.1-like isoform X1.
 
    
 0.859
RAP1B
Ras-related protein Rap-1b isoform X1.
     
 0.806
LOC102740357
Cell division control protein 42 homolog.
    
 0.786
CDC42
Cell division control protein 42 homolog.
    
 0.786
SEMA3A
semaphorin-3A; Belongs to the semaphorin family.
     
 0.662
PTPN18
Tyrosine-protein phosphatase non-receptor type 18 isoform X1.
 
      0.622
PLXNA1
plexin-A1.
     
 0.575
PIP5K1A
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1.
     
 0.555
ANKMY1
Ankyrin repeat and MYND domain-containing protein 1.
     
 0.549
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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