STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102729100Ubinuclein-1-like. (207 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin-binding protein cabin-1.
   
 0.998
ASF1A
Histone chaperone ASF1A.
    
 0.997
LOC102738818
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.997
ASF1B
Histone chaperone ASF1B.
    
 0.808
ZMYM3
Zinc finger MYM-type protein 3 isoform X1.
   
  
 0.565
ATRX
Transcriptional regulator ATRX isoform X1.
     
 0.549
ZNF639
Zinc finger protein 639.
      
 0.539
PTPRR
Receptor-type tyrosine-protein phosphatase R isoform X1.
      
 0.493
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
      
 0.493
ZBTB2
Zinc finger and BTB domain-containing protein 2.
      
 0.481
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.