STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102743151RING finger protein 165-like. (326 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
 0.999
LOC102750322
polyubiquitin-B-like.
    
  0.987
UBE2D3
Ubiquitin-conjugating enzyme E2 D3 isoform X3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.862
LOC102728106
Ubiquitin-conjugating enzyme E2 D2-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.725
SLC39A6
Zinc transporter ZIP6.
      
 0.656
UBE2T
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.629
SKOR2
SKI family transcriptional corepressor 2.
      
 0.607
LOC102729636
polyubiquitin-B-like.
    
  0.587
ZFYVE16
Zinc finger FYVE domain-containing protein.
    
 
 0.505
ARFGAP3
ADP-ribosylation factor GTPase-activating protein 3 isoform X1.
      
 0.503
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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