STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS18A28S ribosomal protein S18a, mitochondrial. (196 aa)    
Predicted Functional Partners:
LOC102730497
28S ribosomal protein S18c, mitochondrial-like.
   
 0.979
MRPS18C
28S ribosomal protein S18c, mitochondrial.
   
 0.979
LOC102730487
39S ribosomal protein L21, mitochondrial-like.
   
 
 0.972
MRPS14
28S ribosomal protein S14, mitochondrial.
   
 0.955
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.955
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.953
MRPS30
LOW QUALITY PROTEIN: 28S ribosomal protein S30, mitochondrial.
   
 0.951
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.946
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 0.945
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
   
 0.945
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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