STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENKD1Enkurin domain-containing protein 1. (346 aa)    
Predicted Functional Partners:
LIG4
DNA ligase.
  
 0.750
LOC102743157
Meiotic recombination protein REC114-like.
    
 0.690
EXO1
LOW QUALITY PROTEIN: exonuclease 1.
   
 0.645
GFOD2
Glucose-fructose oxidoreductase domain-containing protein 2.
 
 
  
 0.632
TMEM129
Transmembrane protein 129.
   
  
 0.623
GEN1
Flap endonuclease GEN homolog 1.
   
 0.615
CLHC1
Clathrin heavy chain linker domain-containing protein 1.
      
 0.608
NEIL1
Endonuclease 8-like 1.
   
 0.577
CALY
Neuron-specific vesicular protein calcyon.
      
 0.548
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.546
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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