STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102737651PHD finger protein 20-like protein 1-like. (183 aa)    
Predicted Functional Partners:
LOC102744425
PHD finger protein 20-like protein 1-like.
 
     0.928
PHF20L1
PHD finger protein 20-like protein 1-like isoform X1.
 
     0.917
FANCM
Fanconi anemia group M protein.
    
 0.915
H6PD
GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.551
ANKMY2
Ankyrin repeat and MYND domain-containing protein 2.
    
 
 0.496
L3MBTL1
Lethal(3)malignant brain tumor-like protein 1.
      
 0.479
PPP2R5C
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
      
 0.477
MEIOB
Meiosis-specific with OB domain-containing protein.
    
 0.452
CHD1
chromodomain-helicase-DNA-binding protein 1 isoform X1.
   
 0.421
MBTD1
MBT domain-containing protein 1.
   
  
 0.414
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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