STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102749332Transmembrane protein 242-like. (141 aa)    
Predicted Functional Partners:
SCAF8
Protein SCAF8 isoform X1.
      
 0.859
SERAC1
Protein SERAC1.
      
 0.797
GTF2H5
General transcription factor IIH subunit 5.
      
 0.769
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
   
  
 0.545
OXLD1
Oxidoreductase-like domain-containing protein 1.
      
 0.507
FAM173A
Protein FAM173A.
      
 0.506
METTL12
Methyltransferase-like protein 12, mitochondrial.
      
 0.487
LYRM9
LYR motif-containing protein 9; Belongs to the complex I LYR family.
      
 0.487
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.480
IZUMO4
Izumo sperm-egg fusion protein 4 isoform X1.
      
 0.474
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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