STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102734751Intraflagellar transport protein 172 homolog. (1210 aa)    
Predicted Functional Partners:
IFT57
Intraflagellar transport protein 57 homolog.
   
 0.990
IFT80
Intraflagellar transport protein 80 homolog.
   
 0.986
IFT46
Intraflagellar transport protein 46 homolog.
   
 0.981
LOC102746003
Clusterin-associated protein 1-like.
    
 0.963
TTC26
Tetratricopeptide repeat protein 26 isoform X1.
    
 0.960
LOC102749886
Intraflagellar transport protein 172 homolog.
 
     0.949
IFT27
Intraflagellar transport protein 27 homolog isoform X1.
    
 0.949
RABL5
Rab-like protein 5 isoform X1.
    
 0.943
HSPB11
Intraflagellar transport protein 25 homolog.
    
 0.907
LOC102735189
Intraflagellar transport protein 20 homolog.
    
 0.835
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.