STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAMDC4Apical endosomal glycoprotein. (1209 aa)    
Predicted Functional Partners:
LOC102727421
Transmembrane protein 121-like.
      
 0.582
VWCE
Von Willebrand factor C and EGF domain-containing protein.
      
 0.551
ITSN2
Intersectin-2.
     
 0.504
LOC102731327
Astrotactin-2-like.
    
 
 0.500
FDXR
NADPH:adrenodoxin oxidoreductase, mitochondrial.
      
 0.473
CNIH3
Protein cornichon homolog 3.
      
 0.469
PTK7
Inactive tyrosine-protein kinase 7 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.466
SOWAHA
Ankyrin repeat domain-containing protein SOWAHA.
  
 
  0.459
LOC102733426
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 0.454
RASD1
Dexamethasone-induced Ras-related protein 1.
    
 0.440
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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