STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (992 aa)    
Predicted Functional Partners:
UNC5CL
UNC5C-like protein.
      
 0.502
SLC44A4
Choline transporter-like protein 4 isoform X1; Belongs to the CTL (choline transporter-like) family.
      
 0.497
VARS2
valine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.467
LOC102743121
Mucin-21-like.
      
 0.467
FREM3
LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3.
    
 0.448
ANKRD32
Ankyrin repeat domain-containing protein 32 isoform X1.
   
 0.439
LY6G6C
Lymphocyte antigen 6 complex locus protein G6c.
      
 0.437
SLC39A7
Zinc transporter SLC39A7 isoform X1.
      
 0.424
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.