STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC3AC-type lectin domain family 3 member A. (161 aa)    
Predicted Functional Partners:
LOC102732818
Cytochrome P450 11B1, mitochondrial-like isoform X1; Belongs to the cytochrome P450 family.
   
    0.675
TAF1D
TATA box-binding protein-associated factor RNA polymerase I subunit D.
      
 0.632
LOC102741720
Synaptic vesicle membrane protein VAT-1 homolog-like.
 
   
 0.596
SYF2
pre-mRNA-splicing factor SYF2.
      
 0.587
CHRDL2
Chordin-like protein 2-like.
    
 0.531
COL9A3
Collagen alpha-3(IX) chain.
   
 
 0.497
LECT1
Leukocyte cell-derived chemotaxin 1.
    
 0.496
ADIRF
Adipogenesis regulatory factor.
      
 0.485
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.483
AGTR2
Type-2 angiotensin II receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.480
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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