STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102746061Homeobox protein cut-like 2-like. (698 aa)    
Predicted Functional Partners:
SATB2
DNA-binding protein SATB.
    
 
 0.648
FEZF2
Fez family zinc finger protein 2.
    
 
 0.606
LOC102730272
Transducin-like enhancer protein 4-like.
    
 
 0.487
TBR1
T-box brain protein 1.
    
 
 0.483
SOX5
Transcription factor SOX-5 isoform X2.
      
 0.481
DLX1
Homeobox protein DLX-1 isoform X1.
   
  
 0.474
CCDC92
Coiled-coil domain-containing protein 92.
      
 0.473
SATB1
DNA-binding protein SATB1-like.
    
 
 0.421
TFAP2D
Transcription factor AP-2-delta-like.
   
  
 0.407
LOC102742614
Peripheral plasma membrane protein CASK-like.
   
 
 0.400
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.