STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SV2ASynaptic vesicle glycoprotein 2A. (742 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma-1.
     
 0.832
LAMA5
Laminin subunit alpha-5-like.
     
 0.829
LOC102731565
Laminin subunit gamma-3-like.
     
 0.804
LAMB2
Laminin subunit beta-2 isoform X1.
     
 0.802
SPNS1
Protein spinster homolog 1 isoform X1.
    
 
 0.480
MFSD9
Major facilitator superfamily domain-containing protein 9.
      
 0.476
MFSD7
Major facilitator superfamily domain-containing protein 7.
      
 0.474
TMBIM1
Protein lifeguard 3; Belongs to the BI1 family.
      
 0.471
SSX2IP
Afadin- and alpha-actinin-binding protein.
    
 0.422
INTS1
Integrator complex subunit 1.
    
 0.419
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.