STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS1Sortilin. (783 aa)    
Predicted Functional Partners:
ZFP69
Zinc finger protein ZFP69.
    
 
 0.642
GGA1
ADP-ribosylation factor-binding protein GGA1 isoform X2.
    
 
 0.636
APP
Amyloid beta A4 protein.
    
 0.616
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
     
 0.591
VPS35
Vacuolar protein sorting-associated protein 35.
    
 
 0.591
NGF
Beta-nerve growth factor; Belongs to the NGF-beta family.
    
 
 0.561
LOC102727885
VPS10 domain-containing receptor SorCS1-like.
 
     0.560
PSMA4
Proteasome subunit alpha type.
    
   0.533
LOC102732367
Proteasome subunit beta type-1-like.
    
   0.533
ABCG8
LOW QUALITY PROTEIN: ATP-binding cassette, sub-family G (WHITE), member 8.
      
 0.499
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.