STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain-9; Belongs to the peptidase C2 family. (492 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
0.748
CAPNS2
Calpain small subunit 2.
   
0.748
DYSF
Dysferlin isoform X1.
      
 0.703
LOC102730020
Myosin-7-like.
   
  
 0.616
TNNT3
Troponin T, fast skeletal muscle.
   
  
 0.609
LOC102744912
Myosin light chain kinase, smooth muscle-like isoform X2.
   
 
 0.608
ITSN2
Intersectin-2.
   
 
  0.585
LOC102729404
Cytochrome c oxidase subunit 6A, mitochondrial.
   
    0.579
LOC102750801
filamin-C-like.
    
 
 0.565
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
  
 0.551
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.