STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102742062T-box transcription factor TBX5-like. (308 aa)    
Predicted Functional Partners:
NKX2-5
Homeobox protein Nkx-2.5.
   
 
 0.978
KAT2B
Histone acetyltransferase KAT2B.
     
 0.961
WWTR1
WW domain-containing transcription regulator protein 1.
    
 0.905
LOC102744093
WW domain-containing transcription regulator protein 1-like.
    
 0.905
YAP1
Yorkie homolog.
    
 0.876
GATA4
Transcription factor GATA-4 isoform X1.
   
 0.769
LOC102727186
Heart- and neural crest derivatives-expressed protein 2-like.
   
 0.729
LOC102745156
Catenin beta-1-like isoform X1.
    
 0.727
MEF2C
Myocyte-specific enhancer factor 2C-like isoform X2.
      
 0.715
VAX2
Ventral anterior homeobox 2.
     
 0.664
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.