STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102740269Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (179 aa)    
Predicted Functional Partners:
CHCHD4
Mitochondrial intermembrane space import and assembly protein 40.
    
 
 0.750
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
    0.600
MFSD6
Major facilitator superfamily domain-containing protein 6.
      
 0.594
LOC102737484
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
    
 
 0.576
MIPEP
Mitochondrial intermediate peptidase.
      
 0.546
PHB2
Prohibitin.
    
 
 0.536
TIMM10
Mitochondrial import inner membrane translocase subunit Tim10.
   
 
 0.525
RPA3
Replication protein A 14 kDa subunit.
      
 0.507
LOC102732625
Metalloendopeptidase OMA1, mitochondrial-like.
    
 
 0.503
ATP6
ATP synthase subunit a.
    
 
 0.503
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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