STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5Bsemaphorin-5B-like. (989 aa)    
Predicted Functional Partners:
SEMA5A
semaphorin-5A-like.
  
  
 
0.811
PLXNA1
plexin-A1.
    
 0.720
PLXNB1
plexin-B1.
    
 0.695
ANO8
Anoctamin.
      
 0.694
PLXNA3
plexin-A3.
    
 0.654
MET
Hepatocyte growth factor receptor.
    
 0.636
LOC102740168
Hepatocyte growth factor receptor-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.636
ANAPC4
Anaphase-promoting complex subunit 4-like.
      
 0.633
LOC102725939
Cadherin-18-like; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.546
SORCS2
Sortilin.
      
 0.544
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.