STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDEM1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (361 aa)    
Predicted Functional Partners:
LOC102728367
ER degradation-enhancing alpha-mannosidase-like protein 1-like.
 
     0.925
EDEM3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.829
CANX
Calnexin isoform X1.
   
 
 0.680
DNAJB9
dnaJ homolog subfamily B member 9 isoform X1.
    
 
 0.644
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 
 0.562
ERO1LB
ERO1-like protein beta.
   
  
 0.548
LOC102747329
dnaJ homolog subfamily B member 11-like isoform X1.
    
 
 0.536
PDIA4
Protein disulfide-isomerase A4.
   
 
 0.530
DNAJC3
dnaJ homolog subfamily C member 3.
   
 
 0.529
HSPA5
78 kDa glucose-regulated protein isoform X2; Belongs to the heat shock protein 70 family.
   
 
 0.529
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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