STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAN2A2Alpha-mannosidase. (1150 aa)    
Predicted Functional Partners:
MGAT2
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2.
     
 0.939
LOC102726297
Alpha-(1,6)-fucosyltransferase-like isoform X2; Belongs to the glycosyltransferase 23 family.
    
 0.936
LOC102736662
Coatomer subunit beta'-like.
 
      0.734
LOC102735455
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
     
 0.721
LOC102735868
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC-like.
     
 0.688
MAN1A1
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA.
     
 0.628
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
      
 0.600
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.561
GOLPH3L
Golgi phosphoprotein 3-like isoform X1.
      
 0.556
FAM3C
Protein FAM3C.
     
 0.550
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.