STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102726185SLIT-ROBO Rho GTPase-activating protein 3-like. (300 aa)    
Predicted Functional Partners:
SRGAP1
SLIT-ROBO Rho GTPase-activating protein 1.
  
 
 
0.910
ITSN2
Intersectin-2.
   
 0.899
LOC102740357
Cell division control protein 42 homolog.
    
 0.835
CDC42
Cell division control protein 42 homolog.
    
 0.835
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.737
LRRC16B
Leucine-rich repeat-containing protein 16B.
    
 0.604
ROBO4
Roundabout homolog 4.
    
 0.604
WASL
Neural Wiskott-Aldrich syndrome protein.
   
 0.592
WIPF1
WAS/WASL-interacting protein family member 1.
    
 0.567
NCKIPSD
NCK-interacting protein with SH3 domain.
    
 
 0.560
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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