STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102733953Zinc finger FYVE domain-containing protein 26-like. (689 aa)    
Predicted Functional Partners:
AP5Z1
AP-5 complex subunit zeta-1.
      
 0.911
PLEKHH1
Pleckstrin homology domain-containing family H member 1.
      
 0.646
M6PR
Cation-dependent mannose-6-phosphate receptor.
      
 0.644
CNOT8
CCR4-NOT transcription complex subunit 8.
      
 0.632
LOC102729387
F-box only protein 7-like.
      
 0.587
VPS13C
Vacuolar protein sorting-associated protein 13C-like.
   
  
 0.564
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
      
 0.553
LOC102740255
Beta-taxilin-like.
      
 0.548
FBXO18
F-box only protein 18.
      
 0.505
BRCA2
Breast cancer type 2 susceptibility protein homolog.
      
 0.493
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.