STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R35Protein phosphatase 1 regulatory subunit 35. (264 aa)    
Predicted Functional Partners:
RTTN
Rotatin.
      
 0.918
LOC102745334
Pyridoxal-dependent decarboxylase domain-containing protein 1-like.
      
 0.762
BAHD1
Bromo adjacent homology domain-containing 1 protein isoform X1.
      
 0.699
CCDC9
Coiled-coil domain-containing protein 9.
      
 0.640
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
      
 0.634
CHMP2A
Charged multivesicular body protein 2a isoform X1.
      
 0.610
TATDN2
Putative deoxyribonuclease TATDN2.
      
 0.579
CEP44
Centrosomal protein of 44 kDa.
      
 0.502
POC1A
POC1 centriolar protein homolog A-like.
      
 0.480
ZFP42
Zinc finger protein 42 homolog.
      
 0.476
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.