STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102740766piggyBac transposable element-derived protein 5-like. (245 aa)    
Predicted Functional Partners:
THAP9
DNA transposase THAP9.
    
 
 0.785
XKR7
XK-related protein.
      
 0.739
LOC102730162
T-cell surface glycoprotein CD3 gamma chain-like.
   
 0.715
LOC102734398
T-cell surface glycoprotein CD3 gamma chain-like.
   
 0.715
GIN1
Gypsy retrotransposon integrase-like protein 1.
   
 
 0.708
LOC102740466
Polypeptide N-acetylgalactosaminyltransferase 2-like.
      
 0.676
CD247
T-cell surface glycoprotein CD3 zeta chain.
   
 0.656
PGBD2
piggyBac transposable element-derived protein 2.
    
 
 0.639
LOC102733718
Zinc finger BED domain-containing protein 1-like.
    
 
 0.631
FAM83C
Protein FAM83C.
      
 0.629
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.