STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102733272Cartilage matrix protein-like. (279 aa)    
Predicted Functional Partners:
COL9A1
Collagen alpha-1(IX) chain.
 
 
 0.883
COL7A1
Collagen alpha-1(VII) chain-like.
 
  
  0.795
COL19A1
Collagen alpha-1(XIX) chain.
 
  
  0.786
TBL3
Transducin beta-like protein 3.
      
 0.745
COL9A3
Collagen alpha-3(IX) chain.
 
 
 0.717
MIA
Melanoma-derived growth regulatory protein.
      
 0.636
COLQ
Acetylcholinesterase collagenic tail peptide.
 
  
  0.631
LOC102748022
Xin actin-binding repeat-containing protein 2-like.
    
 0.532
SLC9A3R2
Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X1.
   
 0.520
RBPJL
Recombining binding protein suppressor of hairless-like protein.
    
 0.501
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.