STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102725683Intermediate filament family orphan 2-like. (205 aa)    
Predicted Functional Partners:
LOC102744037
Importin subunit alpha-3-like.
      
 0.701
GGA3
ADP-ribosylation factor-binding protein GGA3 isoform X1.
      
 0.638
WNK3
Serine/threonine-protein kinase WNK3 isoform X2.
      
 0.615
DHRS9
Dehydrogenase/reductase SDR family member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.582
JMJD8
jmjC domain-containing protein 8.
      
 0.581
CEND1
Cell cycle exit and neuronal differentiation protein 1.
      
 0.548
LIG4
DNA ligase.
    
 
 0.518
EVX2
Homeobox even-skipped homolog protein 2.
      
 0.489
ACSS2
Acetyl-coenzyme A synthetase, cytoplasmic isoform X2.
      
 0.482
CHKB
Choline/ethanolamine kinase.
      
 0.475
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.