STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102745333Serine palmitoyltransferase 2-like. (211 aa)    
Predicted Functional Partners:
SORD
Sorbitol dehydrogenase.
  
 
 0.915
PSPH
Phosphoserine phosphatase.
    
 0.902
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.870
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.854
LOC102741621
Serine--pyruvate aminotransferase.
    
 0.848
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.838
SDS
L-serine dehydratase/L-threonine deaminase.
    
 0.836
SRR
Serine racemase.
    
 0.836
ADHFE1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.
    
 0.808
ORMDL1
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.789
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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