STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC40A1Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (545 aa)    
Predicted Functional Partners:
HAMP
Hepcidin.
    
 
 0.928
HEPHL1
Hephaestin-like protein 1-like.
    
 0.667
LOC102733491
Hephaestin-like protein 1-like; Belongs to the multicopper oxidase family.
    
 0.667
EDIL3
EGF-like repeat and discoidin I-like domain-containing protein 3 isoform X1.
    
 0.642
TFR2
Transferrin receptor protein 2-like.
      
 0.623
LOC102746667
Retinoschisin-like.
    
 0.622
ATP13A3
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.584
SLC11A2
Natural resistance-associated macrophage protein 2 isoform X2.
      
 0.544
HFE2
Hemojuvelin-like isoform X1.
      
 0.541
TFRC
Transferrin receptor protein 1 isoform X1.
      
 0.540
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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