STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102739181Ubiquitin carboxyl-terminal hydrolase 4-like; Belongs to the peptidase C19 family. (611 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.930
LOC102750322
polyubiquitin-B-like.
    
 0.797
IDE
Insulin-degrading enzyme isoform X1; Belongs to the peptidase M16 family.
 
 
    0.732
TOX4
TOX high mobility group box family member 4.
   
  
 0.701
USP15
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
  
 
 
0.692
LOC102730334
Zinc finger with UFM1-specific peptidase domain protein-like.
   
 
 0.629
NRD1
Nardilysin isoform X1; Belongs to the peptidase M16 family.
 
 
    0.628
GIGYF2
PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1.
   
  
 0.617
RBMX2
RNA-binding motif protein, X-linked 2.
      
 0.607
TBC1D25
TBC1 domain family member 25 isoform X2.
   
  
 0.606
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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