STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHI3L1Chitinase-3-like protein 1; Belongs to the glycosyl hydrolase 18 family. (384 aa)    
Predicted Functional Partners:
COX3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.790
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.785
LOC102728825
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.749
LOC102737233
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.681
LOC102732026
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.636
LOC102751186
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.636
LOC102729372
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6B.
   
 0.626
LOC102739825
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6B.
   
 0.626
LOC102728289
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6B.
   
 0.626
LOC102747264
Uncharacterized protein C19orf43 homolog.
   
 0.626
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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