STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102750521NMDA receptor-regulated protein 2-like. (239 aa)    
Predicted Functional Partners:
ZC3H8
Zinc finger CCCH domain-containing protein 8.
     
 0.979
METTL14
Methyltransferase-like protein 14; Belongs to the MT-A70-like family.
   
 
 0.860
SERINC1
Serine incorporator 1.
      
 0.698
LOC102725708
Zinc finger CCCH domain-containing protein 4-like.
     
 0.609
VWA9
Von Willebrand factor A domain-containing protein 9 isoform X1.
  
  0.594
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X2.
     
 0.592
CCHCR1
Coiled-coil alpha-helical rod protein 1.
      
 0.589
FCRL6
LOW QUALITY PROTEIN: Fc receptor-like 6.
      
 0.589
LOC102734176
Serine incorporator 2-like.
      
 0.579
RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2.
    
 0.551
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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