STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102740770Tripeptidyl-peptidase 1-like. (572 aa)    
Predicted Functional Partners:
LOC102731771
Telomeric repeat-binding factor 2-interacting protein 1-like.
    
 0.716
LOC102727300
Battenin-like.
      
 0.706
TBPL1
TATA box-binding protein-like protein 1.
    
 0.669
CLN8
Protein CLN8.
    
 
 0.650
POT1
Protection of telomeres protein 1-like.
    
 0.634
PPT1
Palmitoyl-protein thioesterase 1 isoform X1.
   
  
 0.607
MFSD8
Major facilitator superfamily domain-containing protein 8.
      
 0.581
TINF2
LOW QUALITY PROTEIN: TERF1-interacting nuclear factor 2.
    
 0.520
IDS
Iduronate 2-sulfatase isoform X1.
    
 
 0.510
CTSD
Cathepsin D; Belongs to the peptidase A1 family.
   
 
 0.505
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.