STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102744008Keratin, type II cytoskeletal 2 oral-like; Belongs to the intermediate filament family. (134 aa)    
Predicted Functional Partners:
LOC102744407
Keratin, type II cytoskeletal 8-like; Belongs to the intermediate filament family.
 
 
  0.904
RANBP2
E3 SUMO-protein ligase RanBP2.
    
 0.486
ACTR5
Actin-related protein 5.
    
 0.475
MCRS1
Microspherule protein 1 isoform X2.
    
  0.473
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X2.
    
 0.472
INO80
DNA helicase INO80-like.
    
  0.453
INO80C
INO80 complex subunit C.
    
 0.448
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.444
INO80B
INO80 complex subunit B isoform X1.
   
  0.421
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.