STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00128PTS system, galactitol-specific IIA component. (159 aa)    
Predicted Functional Partners:
C821_00497
PTS system, Fru family, IIC component.
  
 
 0.962
C821_00339
PTS system, mannose/fructose/sorbose family, IIB component.
 
 
 0.952
C821_01253
Phosphocarrier protein HPr.
  
 
 0.949
C821_00496
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.749
C821_01330
PTS system, sucrose-specific IIBC component.
  
 
 0.734
C821_01091
PTS system, mannitol-specific IIC component.
  
 
 0.661
C821_01090
PTS system, mannitol-specific IIA component.
 
 
 0.651
C821_01092
Hypothetical protein.
 
 
 0.622
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
  
 
 0.600
C821_01721
Fructose-1,6-bisphosphate aldolase, class II.
  
 
 0.551
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.