STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00171Hypothetical protein; Belongs to the HesB/IscA family. (130 aa)    
Predicted Functional Partners:
C821_01394
Hypothetical protein.
  
     0.649
C821_00525
Hypothetical protein.
  
     0.595
C821_00172
Hypothetical protein.
 
     0.586
C821_00170
Hypothetical protein.
       0.576
C821_00120
Hypothetical protein.
  
     0.528
C821_00739
Hypothetical protein.
  
     0.506
C821_01808
23S rRNA (-2'-O)/16S rRNA (-2'-O)-methyltransferase.
  
     0.496
C821_00167
Hypothetical protein.
 
     0.480
C821_01302
Thioredoxin; Belongs to the thioredoxin family.
   
    0.476
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.449
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.