STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00176Hypothetical protein. (53 aa)    
Predicted Functional Partners:
C821_00328
Hypothetical protein.
  
     0.765
C821_00234
Hypothetical protein.
  
     0.753
C821_01898
Hypothetical protein.
  
     0.747
C821_01019
Hypothetical protein.
  
     0.743
C821_01896
Hypothetical protein.
  
     0.721
C821_00194
Transcriptional activator, Rgg/GadR/MutR family domain-containing protein.
  
     0.712
C821_01355
Hypothetical protein.
  
     0.712
C821_01020
Hypothetical protein.
  
     0.680
C821_01391
Hypothetical protein.
  
     0.671
C821_01900
Hypothetical protein.
  
     0.668
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.