STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00178Cobalt/nickel transport system ATP-binding protein. (56 aa)    
Predicted Functional Partners:
C821_00180
Cobalt/nickel transport system permease.
  
 0.847
ecfT
Cobalt/nickel transport system permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.847
ecfA
Cobalt/nickel transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  0.668
ecfA-2
Hypothetical protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  0.668
C821_01573
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain protein; Belongs to the ABC transporter superfamily.
  
 
 0.631
C821_01794
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain protein; Belongs to the ABC transporter superfamily.
  
 
 0.631
C821_01575
Oligopeptide transport system permease.
  
 
 0.526
C821_01792
Peptide/nickel transport system permease.
  
 
 0.526
C821_01574
Oligopeptide transport system permease.
  
 
 0.520
C821_01791
Peptide/nickel transport system permease.
  
 
 0.520
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.