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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00226Hypothetical protein. (196 aa)    
Predicted Functional Partners:
C821_01902
LPXTG-domain-containing protein cell wall anchor domain protein.
  
 0.892
C821_00120
Hypothetical protein.
  
   0.831
C821_00227
Hypothetical protein.
       0.788
C821_01084
Hypothetical protein.
  
     0.688
C821_00001
rib/alpha/Esp surface antigen.
 
 
  0.662
C821_00381
Hypothetical protein.
 
  
  0.607
C821_00044
Hypothetical protein.
   
  0.565
C821_00323
rib/alpha/Esp surface antigen.
   
  0.565
C821_00359
Hypothetical protein.
   
  0.565
C821_00488
Bacterial surface protein 26-residue.
   
  0.565
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.