STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00307Hypothetical protein. (524 aa)    
Predicted Functional Partners:
C821_01524
ABC-type bacteriocin transporter.
 
 
 
0.830
C821_01266
ATP-binding cassette, subfamily C, bacterial.
 
0.784
C821_00480
ATP-binding cassette, subfamily B, bacterial.
 
0.765
C821_00306
Transcriptional activator, Rgg/GadR/MutR family domain-containing protein.
 
     0.721
C821_01898
Hypothetical protein.
  
     0.718
C821_01900
Hypothetical protein.
  
     0.668
C821_01355
Hypothetical protein.
  
     0.605
C821_01655
Hypothetical protein.
  
   0.599
C821_01083
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.593
ybeY
YbeY/UPF0054 family metalloprotein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.587
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.