STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00383Glycerol-3-phosphate cytidylyltransferase. (128 aa)    
Predicted Functional Partners:
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.983
C821_00390
Hypothetical protein.
 
  
 0.805
C821_00384
WecB/TagA/CpsF family glycosyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
  
  
 0.800
C821_00385
Hypothetical protein.
  
  
 0.607
C821_00220
TIGR02254 family HAD hydrolase.
  
 
  0.602
C821_00270
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
 
 0.585
C821_01497
oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
  
 
 0.585
C821_01232
Hypothetical protein.
   
 
  0.504
C821_01233
Hypothetical protein.
   
 
  0.504
C821_00945
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
  
 
  0.482
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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