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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00405Na+/H+ antiporter NhaC. (457 aa)    
Predicted Functional Partners:
C821_00404
Hypothetical protein; Belongs to the BI1 family.
       0.548
C821_01980
Solute:sodium symporter (SSS) family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.533
C821_00497
PTS system, Fru family, IIC component.
     
 0.495
C821_00098
CPA2 family monovalent cation:H+ antiporter-2; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
      
 0.431
C821_01330
PTS system, sucrose-specific IIBC component.
      
 0.414
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.