STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00467Hypothetical protein. (179 aa)    
Predicted Functional Partners:
C821_00593
Hypothetical protein.
    0.964
C821_01138
Flavocytochrome c; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
  0.936
C821_00945
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.914
C821_01082
Hypothetical protein.
    
  0.879
C821_00468
Hypothetical protein.
 
  
 
0.877
C821_00353
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
    
 0.844
C821_00470
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.790
C821_00744
Hypothetical protein.
  
  0.772
C821_00220
TIGR02254 family HAD hydrolase.
  
 
  0.560
C821_00469
Protein-tyrosine phosphatase.
       0.518
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.