STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00484Hypothetical protein. (228 aa)    
Predicted Functional Partners:
C821_00485
Hypothetical protein.
 0.993
C821_01676
Hypothetical protein.
 0.979
C821_01060
Hypothetical protein.
 0.970
C821_00188
PAS domain S-box protein.
 0.932
C821_00819
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.863
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
       0.687
C821_00945
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
 
   
 0.686
C821_00487
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.624
C821_00471
Exodeoxyribonuclease III (xth).
  
  
 0.499
C821_00295
Hypothetical protein.
   
 
 0.482
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.