STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00499Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (300 aa)    
Predicted Functional Partners:
C821_00500
Zinc/manganese transport system ATP-binding protein.
 
 
 0.999
C821_00501
Zinc/manganese transport system permease.
 
 
 0.999
C821_01929
Hypothetical protein.
  
 
 0.669
rpsZ
30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.617
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.587
C821_00429
Multiple sugar-binding transport ATP-binding protein MsmK; Belongs to the ABC transporter superfamily.
    
  0.518
C821_00602
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.518
C821_00498
ArsR family transcriptional regulator.
     
 0.485
C821_01176
Hypothetical protein; Belongs to the Fur family.
  
  
 0.472
C821_00502
Hypothetical protein.
       0.418
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.