STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00509Cytochrome d ubiquinol oxidase, subunit II. (338 aa)    
Predicted Functional Partners:
C821_00508
Cytochrome d ubiquinol oxidase subunit I.
 
 0.999
C821_00510
Thiol reductant ABC exporter, CydD subunit.
 
  
 0.994
C821_00511
Thiol reductant ABC exporter, CydC subunit.
 
  
 0.990
C821_00514
NADH dehydrogenase.
 
  
 0.834
C821_00513
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
     0.587
C821_00744
Hypothetical protein.
    
  0.501
C821_00346
Acetaldehyde dehydrogenase/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.468
C821_00512
Hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
    0.433
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.