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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00514NADH dehydrogenase. (406 aa)    
Predicted Functional Partners:
C821_00513
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
 
  0.972
C821_00512
Hypothetical protein; Belongs to the FPP/GGPP synthase family.
 
  
 0.907
C821_00508
Cytochrome d ubiquinol oxidase subunit I.
 
  
 0.840
C821_00509
Cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.834
C821_00511
Thiol reductant ABC exporter, CydC subunit.
 
   
 0.800
C821_01302
Thioredoxin; Belongs to the thioredoxin family.
   
 0.770
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.761
gpmA-2
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.761
C821_00510
Thiol reductant ABC exporter, CydD subunit.
 
     0.757
C821_01983
NADH peroxidase.
  
 
 0.727
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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