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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00560Hypothetical protein. (330 aa)    
Predicted Functional Partners:
C821_00559
Hypothetical protein.
 
     0.929
C821_01775
YSIRK family gram-positive signal peptide.
  
     0.744
C821_01763
Hypothetical protein.
  
     0.697
C821_01769
Hypothetical protein.
  
     0.689
C821_01777
YSIRK family gram-positive signal peptide.
  
     0.663
C821_01758
Hypothetical protein.
  
     0.636
C821_01950
Hypothetical protein.
  
     0.633
C821_01771
YSIRK family gram-positive signal peptide.
  
     0.613
C821_01137
rib/alpha/Esp surface antigen.
  
     0.598
C821_01759
LPXTG-domain-containing protein cell wall anchor domain protein.
  
     0.557
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.