STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00574Hypothetical protein. (231 aa)    
Predicted Functional Partners:
C821_00325
PTS system, lactose/cellobiose family IIC component.
 
     0.629
C821_00573
Hypothetical protein; Belongs to the phosphoglycerate mutase family.
       0.625
C821_00457
Hypothetical protein.
  
     0.579
C821_00729
Hypothetical protein.
  
     0.572
C821_00455
Hypothetical protein.
  
     0.544
C821_01966
Hypothetical protein.
  
     0.542
C821_00575
DNA helicase II/ATP-dependent DNA helicase PcrA.
       0.530
C821_00381
Hypothetical protein.
  
     0.517
C821_00832
Hypothetical protein.
 
     0.495
C821_00997
Rod shape-determining protein MreD.
  
     0.483
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.