STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00596Hypothetical protein. (149 aa)    
Predicted Functional Partners:
C821_00597
Hypothetical protein.
 
    0.962
C821_00598
Hypothetical protein.
 
     0.827
C821_00599
Exonuclease, DNA polymerase III, epsilon subunit.
 
     0.780
C821_00595
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.773
C821_00594
Nicotinamide mononucleotide transporter PnuC.
       0.544
C821_00774
Hypothetical protein.
  
     0.536
C821_00600
DNA-entry nuclease.
       0.522
C821_00357
Hypothetical protein.
  
     0.480
C821_00247
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
     0.458
C821_00169
Hypothetical protein.
  
     0.431
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.